VespaG
Mutation effect scoring for amino-acid substitutions on protein function.
Summary
- Model name:
VespaG - Task: Predict effects of amino-acid variants
- Protocol:
residue_to_class - Embedder:
facebook/esm2_t36_3B_UR50D - Model size:
2.6 MB
Outputs
variant_effect
- Description: Effect of amino-acid mutations on protein function
- Output type:
mutation - Value type:
float - Value range:
0to1 - Unit:
score
References
- Authors: Céline Marquet; Julius Schlensok; Marina Abakarova; Burkhard Rost; Elodie Laine
- Model link: github.com/JSchlensok/VespaG
- Citation: doi.org/10.1093/bioinformatics/btae621
- License:
GPL-3.0 - Training data: zenodo.org/records/11085958